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This work focuses on analyzing of physico-chemical properties of sediment affected by frequent floods along the eastern shore of the Bandama River in the department of Niakaramadougou. Sampling was from 4 excavated graves at two positions of studied area, one near the stream and the other one far away from the stream.. Samples collected were analyzed, including texture with granulometric analysis made by the Robinson pipette, and standard sediment analysis methods for measuring organic carbon (OC), nitrogen (N), and other chemical properties including pH, organic matter (OM), and C/N ratio. Statistical analyses were carried out to assess the differences between the physico-chemical parameters at different sampling areas. Differences are significant when comparing areas that are highly affected by floods and areas that are less affected by floods, especially for concentrations of OM, OC and nitrogen. Results show that successive floods are influencing directly the dynamic of physico-chemical properties of the sediments along the shore.